C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HOP homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337881 HOPX-003 ENSG00000171476 9606 - 4:56647988-56681899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLungOvaryENST00000337881
Transcript ID Bladder Brain Heart Kidney Lung Ovary
ENST00000337881 0.195±0.00 14.772±0.00 0.146±0.00 0.093±0.00 16.775±0.00 0.448±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G9 CIL_0008G9_0001 VISTA 4:56396035-56999166
CIL_0001WR CIL_0001WR_0001 CGP 4:56530609-56681899

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001829 IDA trophectodermal cell differentiation
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0045596 IDA negative regulation of cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081964 Hopx-001 protein_coding Mus_musculus 0 545

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