C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-aminocyclopropane-1-carboxylate synthase (non-functional)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146436 Accs-004 ENSMUSG00000040272 10090 - 2:93837019-93849943 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000146436
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000146436 0.804±0.34 0.392±0.00 0.450±0.36 0.733±0.12 0.436±0.05 0.476±0.00 0.186±0.04 0.824±0.00 0.107±0.02 1.033±0.28 0.210±0.12 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UN CIL_0008UN_0002 VISTA 2:93370139-93973617

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243344 TTC21B-001 protein_coding Homo_sapiens 0.0004 53
ENST00000251250 DTWD1-001 protein_coding Homo_sapiens 0.00007 57
ENST00000263776 ACCS-001 protein_coding Homo_sapiens 0 435
ENST00000312239 HP1BP3-001 protein_coding Homo_sapiens 0.000006 58
ENST00000318442 ZNF366-001 protein_coding Homo_sapiens 0.00007 55
ENST00000322153 IL12RB1-003 protein_coding Homo_sapiens 0.00003 55
ENST00000338148 MRPL30-001 protein_coding Homo_sapiens 0.00005 55
ENST00000370823 MTG2-008 protein_coding Homo_sapiens 0.00001 57
ENST00000372037 BMPR1A-001 protein_coding Homo_sapiens 0.00002 58
ENST00000374045 TNFSF15-001 protein_coding Homo_sapiens 0.00003 57
ENST00000375003 HP1BP3-004 protein_coding Homo_sapiens 0.000007 58
ENST00000396556 OSBPL10-001 protein_coding Homo_sapiens 0.000009 58
ENST00000407325 GPR1-001 protein_coding Homo_sapiens 0.0001 53
ENST00000429492 OSBPL10-002 protein_coding Homo_sapiens 0.00001 58
ENST00000434410 HEMK1-001 protein_coding Homo_sapiens 0.00002 58
ENST00000439326 ZNF844-001 protein_coding Homo_sapiens 0.00003 57
ENST00000443035 DENND4A-001 protein_coding Homo_sapiens 0.00001 58
ENST00000449697 TRIM16L-010 processed_transcript Homo_sapiens 0.000004 57
ENST00000465432 MRPL30-002 processed_transcript Homo_sapiens 0.00003 55
ENST00000467101 MTG2-002 nonsense_mediated_decay Homo_sapiens 0.00001 57
ENST00000468599 CNOT10-015 retained_intron Homo_sapiens 0.000001 58
ENST00000469023 ATP1A4-003 retained_intron Homo_sapiens 0.00007 55
ENST00000474136 APP-013 processed_transcript Homo_sapiens 0.00002 55
ENST00000477671 DNAJB4-006 processed_transcript Homo_sapiens 0.00005 53
ENST00000493652 RBM6-013 retained_intron Homo_sapiens 0.000003 57
ENST00000504763 ARSK-003 protein_coding Homo_sapiens 0.000005 57
ENST00000513816 RAPGEF2-002 retained_intron Homo_sapiens 0.0002 53
ENST00000523490 MATN2-003 retained_intron Homo_sapiens 0.0001 53
ENST00000524990 ACCS-005 protein_coding Homo_sapiens 0 355
ENST00000526577 ACCS-008 retained_intron Homo_sapiens 0 357
ENST00000528426 CHID1-010 nonsense_mediated_decay Homo_sapiens 0.0000001 62
ENST00000533499 NXF1-007 retained_intron Homo_sapiens 0.00002 55
ENST00000533965 ZNF517-011 nonsense_mediated_decay Homo_sapiens 0.00005 55
ENST00000552461 RPLP0-004 retained_intron Homo_sapiens 0.000001 60
ENST00000583950 SUZ12P1-007 processed_transcript Homo_sapiens 0.00001 55
ENST00000599646 TECR-005 retained_intron Homo_sapiens 0.00000009 64
ENST00000601194 PSMC4-005 retained_intron Homo_sapiens 0.00004 53
ENST00000602490 ARPC5-005 retained_intron Homo_sapiens 0.00000009 64
ENST00000609923 SLC25A16-002 protein_coding Homo_sapiens 0.0001 55
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0.00002 58
ENST00000612892 GPR1-201 protein_coding Homo_sapiens 0.0002 53
ENST00000621141 GPR1-202 protein_coding Homo_sapiens 0.0001 53
ENST00000621663 ANAPC16-202 protein_coding Homo_sapiens 0.000005 58
ENST00000623232 RP11-286N22.8-008 TEC Homo_sapiens 0.000008 58

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