C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide E pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338402 SNRPEP3-001 ENSG00000227624 9606 - 16:20238972-20239247 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyTestisENST00000338402
Transcript ID Brain Breast Kidney Testis
ENST00000338402 0.039±0.00 0.038±0.00 0.040±0.00 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065R CIL_00065R_0001 CGP 16:20031485-20327808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166915 Snrpe-001 protein_coding Mus_musculus 0 339
ENSMUST00000121967 Gm14284-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000172079 Snrpe-005 nonsense_mediated_decay Mus_musculus 0 294
ENSMUST00000164096 Snrpe-002 protein_coding Mus_musculus 0 267
ENSMUST00000118757 Gm15553-001 processed_pseudogene Mus_musculus 7.00649e-44 180

Loading