C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15553
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118757 Gm15553-001 ENSMUSG00000080750 10090 - 16:75746050-75746479 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000118757
Transcript ID Testis
ENSMUST00000118757 0.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066K CIL_00066K_0002 CGP 16:75592844-75766821

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338402 SNRPEP3-001 processed_pseudogene Homo_sapiens 7.00649e-44 180
ENST00000367208 SNRPE-004 protein_coding Homo_sapiens 0 187
ENST00000414487 SNRPE-001 protein_coding Homo_sapiens 0 228
ENST00000420249 SNRPEP10-001 processed_pseudogene Homo_sapiens 7e-29 130
ENST00000425442 SNRPEP5-001 processed_pseudogene Homo_sapiens 0 195
ENST00000435815 SNRPEP4-001 processed_pseudogene Homo_sapiens 0 213
ENST00000438350 SNRPEP7-001 processed_pseudogene Homo_sapiens 3e-32 141
ENST00000470492 SNRPE-006 processed_transcript Homo_sapiens 1.4013e-45 187
ENST00000475035 SNRPE-005 processed_transcript Homo_sapiens 0 198
ENST00000483099 SNRPE-002 processed_transcript Homo_sapiens 0 198

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