C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338732 LFNG-201 ENSG00000106003 9606 + 7:2518554-2528427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleOvaryPlacentaENST00000338732
Transcript ID Colon Kidney Muscle Ovary Placenta
ENST00000338732 1.945±0.00 0.731±0.00 0.131±0.00 7.420±0.00 7.148±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RS CIL_0007RS_0001 VISTA 7:2311652-2915186
CIL_00027L CIL_00027L_0002 CGP 7:2474844-2529177

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005576 NAS extracellular region
GO:0007219 TAS Notch signaling pathway
GO:0008152 IEA metabolic process
GO:0008593 ISS regulation of Notch signaling pathway
GO:0009887 NAS organ morphogenesis
GO:0014807 IMP regulation of somitogenesis
GO:0016020 IEA membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030173 IEA integral component of Golgi membrane
GO:0031982 IDA vesicle
GO:0033829 ISS O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031555 Lfng-201 protein_coding Mus_musculus 0 902

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