C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ClpB caseinolytic peptidase B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106998 Clpb-003 ENSMUSG00000001829 10090 + 7:101663705-101787810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106998
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106998 11.733±7.19 15.563±2.04 5.615±3.31 15.620±0.00 11.155±1.64 6.393±1.40 14.462±3.24 16.901±5.44 9.422±5.68 4.061±0.84 8.206±1.75 12.092±3.03 15.751±9.10 223.771±5.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0002 VISTA 7:101413526-102014552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294053 CLPB-001 protein_coding Homo_sapiens 0 2440
ENST00000340729 CLPB-002 protein_coding Homo_sapiens 0 1755
ENST00000437826 CLPB-201 protein_coding Homo_sapiens 0 2102
ENST00000445069 CLPB-009 protein_coding Homo_sapiens 0 508
ENST00000535477 CLPB-005 nonsense_mediated_decay Homo_sapiens 0 1046
ENST00000535990 CLPB-006 protein_coding Homo_sapiens 0 2098
ENST00000536297 CLPB-012 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000538021 CLPB-007 protein_coding Homo_sapiens 0 1195
ENST00000538039 CLPB-003 protein_coding Homo_sapiens 0 1759
ENST00000539148 CLPB-011 protein_coding Homo_sapiens 0 538
ENST00000543042 CLPB-004 protein_coding Homo_sapiens 0 1744
ENST00000544382 CLPB-013 protein_coding Homo_sapiens 0 1133

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