C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ClpB caseinolytic peptidase B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001884 Clpb-001 ENSMUSG00000001829 10090 + 7:101663633-101790168 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000001884
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000001884 3.471±0.58 7.328±0.84 3.419±1.37 4.452±0.35 2.537±0.26 4.858±0.66 3.861±0.52 1.196±0.47 1.915±0.46 3.296±0.88 5.767±2.32 1.738±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0002 VISTA 7:101413526-102014552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0034605 IEA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294053 CLPB-001 protein_coding Homo_sapiens 0 1768
ENST00000340729 CLPB-002 protein_coding Homo_sapiens 0 1899
ENST00000437826 CLPB-201 protein_coding Homo_sapiens 0 1768
ENST00000445069 CLPB-009 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000535477 CLPB-005 nonsense_mediated_decay Homo_sapiens 0 1548
ENST00000535990 CLPB-006 protein_coding Homo_sapiens 0 1755
ENST00000538021 CLPB-007 protein_coding Homo_sapiens 0 1195
ENST00000538039 CLPB-003 protein_coding Homo_sapiens 0 2368
ENST00000543042 CLPB-004 protein_coding Homo_sapiens 0 1958
ENST00000544382 CLPB-013 protein_coding Homo_sapiens 0 1133

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