C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tandem C2 domains, nuclear
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340892 TC2N-004 ENSG00000165929 9606 - 14:91780179-91836440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340892 1.361±0.00 1.412±0.00 0.403±0.00 0.297±0.00 1.003±0.00 4.144±0.00 0.506±0.14 1.165±0.00 0.662±0.51 4.767±0.00 0.638±0.00 1.247±0.59 0.228±0.19 1.789±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AH CIL_0000AH_0001 CGP 14:91457611-91780707
CIL_000538 CIL_000538_0001 CGP 14:91580696-91867536
CIL_00061L CIL_00061L_0002 CGP 14:91779751-91947987

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0010468 IMP regulation of gene expression
GO:0030193 IMP regulation of blood coagulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110047 Tc2n-002 nonsense_mediated_decay Mus_musculus 0 1857
ENSMUST00000162735 Tc2n-001 protein_coding Mus_musculus 0 1857
ENSMUST00000160830 Tc2n-003 protein_coding Mus_musculus 0 1832
ENSMUST00000160715 Tc2n-004 protein_coding Mus_musculus 0 1020

Loading