C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO-interacting motifs containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341199 SIMC1-201 ENSG00000170085 9606 + 5:176238367-176345985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverMuscleOvaryPlacentaENST00000341199
Transcript ID Adipose Breast Heart Kidney Liver Muscle Ovary Placenta
ENST00000341199 0.201±0.00 0.620±0.00 0.186±0.00 0.894±0.00 1.290±0.00 0.705±0.20 5.413±4.40 0.966±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DK CIL_0002DK_0001 CGP 5:176238367-176361968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0032184 IDA SUMO polymer binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118072 Simc1-002 protein_coding Mus_musculus 0 1712
ENSMUST00000121401 Simc1-001 protein_coding Mus_musculus 0 1559
ENSMUST00000126506 Simc1-007 retained_intron Mus_musculus 0 558
ENSMUST00000150011 Simc1-006 retained_intron Mus_musculus 0 385
ENSMUST00000138869 Simc1-003 nonsense_mediated_decay Mus_musculus 0 383

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