C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SUMO-interacting motifs containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170085 SIMC1 9606 + 5:176238367-176345991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332772 SIMC1-003 176313080-176345989 protein_coding
  ENST00000341199 SIMC1-201 176238367-176345985 protein_coding
  ENST00000429602 SIMC1-202 176238491-176345445 protein_coding
  ENST00000430704 SIMC1-002 176238367-176345989 protein_coding
  ENST00000443967 SIMC1-001 176238367-176345991 protein_coding
  ENST00000467472 SIMC1-007 176238507-176296322 processed_transcript
  ENST00000481515 SIMC1-004 176296123-176322815 retained_intron
  ENST00000495423 SIMC1-006 176238382-176296674 retained_intron
  ENST00000503595 SIMC1-009 176270230-176290209 processed_transcript
  ENST00000508769 SIMC1-010 176238453-176289799 processed_transcript
  ENST00000514128 SIMC1-008 176238656-176289954 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332772ENST00000341199ENST00000429602ENST00000430704ENST00000443967ENST00000481515ENST00000503595ENST00000514128
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332772 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.318±0.00 N/A N/A N/A N/A
ENST00000341199 0.201±0.00 N/A N/A N/A 0.620±0.00 N/A 0.186±0.00 0.894±0.00 1.290±0.00 N/A 0.705±0.20 5.413±4.40 0.966±0.09 N/A
ENST00000429602 N/A N/A 0.222±0.00 N/A N/A 0.959±0.18 0.277±0.00 1.018±0.00 0.522±0.00 1.280±0.00 0.890±0.00 1.911±0.80 0.948±0.00 N/A
ENST00000430704 0.322±0.00 1.542±0.00 N/A 1.317±0.00 0.557±0.00 0.453±0.00 N/A N/A 0.901±0.00 N/A N/A 3.928±1.86 0.786±0.00 12.593±1.54
ENST00000443967 0.630±0.00 1.412±0.00 N/A 1.202±0.00 N/A N/A 0.544±0.00 0.372±0.00 N/A 0.707±0.00 0.669±0.00 2.782±2.11 0.768±0.00 N/A
ENST00000481515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.482±0.00 N/A N/A N/A
ENST00000503595 N/A N/A N/A N/A 1.615±0.00 N/A N/A N/A 0.854±0.00 N/A N/A N/A N/A N/A
ENST00000514128 N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 N/A N/A 2.245±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DK CIL_0002DK_0001 CGP 5:176238367-176361968

Gene Ontology
GO IDEvidence TypeGO Description
GO:0032184 IDA SUMO polymer binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089939 SIMC1 SUMO-interacting motifs containing 1 protein_coding Danio_rerio
ENSMUSG00000043183 Simc1 SUMO-interacting motifs containing 1 protein_coding Mus_musculus

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