C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cofilin 2 (muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341223 CFL2-002 ENSG00000165410 9606 - 14:34710387-34713828 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341223 9.731±0.00 1.971±0.00 1.233±0.00 10.187±3.66 5.126±1.77 6.103±0.49 23.786±10.90 8.278±0.00 12.706±9.65 3.773±0.00 20.464±3.64 5.350±2.11 5.692±1.58 11.984±5.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RE CIL_0005RE_0002 CGP 14:34561094-34714823
CIL_0005RD CIL_0005RD_0002 CGP 14:34706769-34875647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0015629 IEA actin cytoskeleton
GO:0030042 IEA actin filament depolymerization
GO:0030836 IMP positive regulation of actin filament depolymerization
GO:0031674 IDA I band
GO:0061001 ISS regulation of dendritic spine morphogenesis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078124 Cfl2-201 protein_coding Mus_musculus 0 1631
ENSDART00000008355 cfl2-001 protein_coding Danio_rerio 0 348

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