Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	tropomyosin 3
ENST00000341485	TPM3-003	ENSG00000143549	9606	-	1:154156364-154183208	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000341485	90.782±0.00	91.808±0.00	6.861±0.00	6.423±0.00	25.867±3.66	33.700±8.09	8.724±6.20	25.386±17.27	14.560±0.29	33.689±17.51	20.332±0.00	48.879±28.78	50.015±11.02	21.667±0.31

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0007165	IEA	signal transduction

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000062193	Tpm3-201	protein_coding	Mus_musculus	0	889
ENSMUST00000029549	Tpm3-003	protein_coding	Mus_musculus	0	889
ENSMUST00000119570	Tpm3-001	protein_coding	Mus_musculus	0	889
ENSMUST00000072359	Tpm3-rs7-201	protein_coding	Mus_musculus	0	889
ENSMUST00000119158	Tpm3-005	protein_coding	Mus_musculus	0	425
ENSMUST00000118566	Tpm3-004	protein_coding	Mus_musculus	0	425
ENSMUST00000121503	Tpm3-002	protein_coding	Mus_musculus	0	425
ENSMUST00000131354	Tpm3-006	retained_intron	Mus_musculus	0	381
ENSMUST00000147430	Tpm3-011	retained_intron	Mus_musculus	0	381
ENSMUST00000133361	Tpm3-013	retained_intron	Mus_musculus	0	374
ENSMUST00000133281	Tpm3-010	retained_intron	Mus_musculus	0	374
ENSMUST00000149734	Tpm3-014	retained_intron	Mus_musculus	0	279
ENSMUST00000151798	Tpm3-012	retained_intron	Mus_musculus	0	243
ENSMUST00000149432	Tpm3-007	protein_coding	Mus_musculus	0	243
ENSMUST00000143281	Tpm3-015	retained_intron	Mus_musculus	0	211
ENSMUST00000149115	Tpm3-009	retained_intron	Mus_musculus	0.000000000000004	88

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