C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342222 IKBKB-001 ENSG00000104365 9606 + 8:42271334-42332450 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000342222
Transcript ID Adipose Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000342222 2.576±0.00 2.362±0.00 1.224±0.28 1.445±0.00 1.449±0.00 1.998±0.00 3.785±0.57 3.135±0.40 3.310±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IG CIL_0007IG_0002 CGP 8:42175233-42332653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033939 Ikbkb-001 protein_coding Mus_musculus 0 2113
ENSMUST00000125314 Ikbkb-002 nonsense_mediated_decay Mus_musculus 0 2085
ENSMUST00000063401 Ikbkb-011 protein_coding Mus_musculus 0 2069
ENSMUST00000135326 Ikbkb-003 nonsense_mediated_decay Mus_musculus 0 1700
ENSMUST00000146212 Ikbkb-010 retained_intron Mus_musculus 0 1038
ENSMUST00000144895 Ikbkb-007 retained_intron Mus_musculus 0 503
ENSMUST00000144583 Ikbkb-008 retained_intron Mus_musculus 0 492
ENSMUST00000150259 Ikbkb-009 retained_intron Mus_musculus 0 492
ENSMUST00000126439 Ikbkb-006 retained_intron Mus_musculus 0 414
ENSMUST00000131767 Ikbkb-014 protein_coding Mus_musculus 0 248

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