C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062707-ENSDARG00000079123 CGP 7955 8:2435980-2581767
GeneTranscriptPositionBiotype
ENSDARG00000062707 (plat)
plasminogen activator, tissue 		ENSDART00000090925 (plat-201) 2436119-2464487 protein_coding
ENSDART00000147275 (plat-001) 2435980-2481545 protein_coding
ENSDARG00000079123 (ikbkb)
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 		ENSDART00000113613 (ikbkb-201) 2497430-2581627 protein_coding
ENSDART00000136743 (ikbkb-002) 2494190-2504344 retained_intron
ENSDART00000140265 (ikbkb-001) 2494159-2581767 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0007IG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104368-ENSG00000104365 CGP 9606 8:42175233-42332653
GeneTranscriptPositionBiotype
ENSG00000104365 (IKBKB)
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 		ENST00000342222 (IKBKB-001) 42271334-42332450 nonsense_mediated_decay
ENST00000416505 (IKBKB-201) 42271302-42332653 protein_coding
ENST00000517388 (IKBKB-020) 42271390-42308932 nonsense_mediated_decay
ENST00000517502 (IKBKB-028) 42317657-42320517 processed_transcript
ENST00000517812 (IKBKB-018) 42271572-42305236 nonsense_mediated_decay
ENST00000517890 (IKBKB-003) 42271316-42331132 nonsense_mediated_decay
ENST00000517917 (IKBKB-007) 42271319-42319750 retained_intron
ENST00000518647 (IKBKB-010) 42271390-42317224 retained_intron
ENST00000518679 (IKBKB-008) 42271319-42331910 nonsense_mediated_decay
ENST00000518983 (IKBKB-019) 42271370-42272429 protein_coding
ENST00000519733 (IKBKB-021) 42271318-42308998 nonsense_mediated_decay
ENST00000519735 (IKBKB-004) 42271318-42309765 protein_coding
ENST00000519938 (IKBKB-014) 42320706-42331609 retained_intron
ENST00000520201 (IKBKB-009) 42271389-42332455 retained_intron
ENST00000520320 (IKBKB-017) 42271310-42306354 nonsense_mediated_decay
ENST00000520655 (IKBKB-012) 42271463-42331909 nonsense_mediated_decay
ENST00000520810 (IKBKB-002) 42271302-42331608 protein_coding
ENST00000520835 (IKBKB-006) 42271318-42331064 protein_coding
ENST00000521225 (IKBKB-026) 42325294-42329187 processed_transcript
ENST00000521661 (IKBKB-011) 42271436-42329215 nonsense_mediated_decay
ENST00000522103 (IKBKB-016) 42325610-42331909 retained_intron
ENST00000522133 (IKBKB-024) 42322418-42326468 retained_intron
ENST00000522147 (IKBKB-022) 42272083-42332037 protein_coding
ENST00000522545 (IKBKB-027) 42314025-42316256 retained_intron
ENST00000522785 (IKBKB-023) 42318608-42319870 processed_transcript
ENST00000523018 (IKBKB-025) 42322441-42329314 retained_intron
ENST00000523105 (IKBKB-005) 42271318-42322461 nonsense_mediated_decay
ENST00000523517 (IKBKB-013) 42272083-42331121 nonsense_mediated_decay
ENST00000523599 (IKBKB-015) 42324638-42329258 retained_intron
ENSG00000104368 (PLAT)
plasminogen activator, tissue 		ENST00000220809 (PLAT-001) 42175233-42207724 protein_coding
ENST00000352041 (PLAT-002) 42175237-42207676 protein_coding
ENST00000429089 (PLAT-003) 42175233-42207565 protein_coding
ENST00000429710 (PLAT-006) 42175747-42207565 protein_coding
ENST00000519510 (PLAT-005) 42175561-42207565 protein_coding
ENST00000520523 (PLAT-012) 42187401-42193727 protein_coding
ENST00000521042 (PLAT-008) 42180306-42187932 nonsense_mediated_decay
ENST00000521647 (PLAT-013) 42184695-42188489 retained_intron
ENST00000521694 (PLAT-011) 42187465-42195698 protein_coding
ENST00000522812 (PLAT-010) 42180083-42180764 retained_intron
ENST00000524009 (PLAT-004) 42175900-42207565 protein_coding
ENST00000524261 (PLAT-009) 42182340-42185113 retained_intron
ENSG00000253408 (RP11-231D20.2)
 ENST00000518213 (RP11-231D20.2-005) 42266129-42271197 antisense
ENST00000518994 (RP11-231D20.2-002) 42255328-42270920 antisense
ENST00000520890 (RP11-231D20.2-003) 42255328-42270388 antisense
ENST00000521470 (RP11-231D20.2-006) 42249052-42263406 antisense
ENST00000521802 (RP11-231D20.2-004) 42255328-42265698 antisense
ENST00000523459 (RP11-231D20.2-001) 42233675-42270911 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IG_0001ENSDARG00000062707ENSDART00000090925ENSDART00000147275ENSDARG00000079123ENSDART00000113613ENSDART00000136743ENSDART00000140265CIL_0007IG_0002ENSG00000104365ENST00000342222ENST00000416505ENST00000517388ENST00000517502ENST00000517812ENST00000517890ENST00000517917ENST00000518647ENST00000518679ENST00000518983ENST00000519733ENST00000519735ENST00000519938ENST00000520201ENST00000520320ENST00000520655ENST00000520810ENST00000520835ENST00000521225ENST00000521661ENST00000522103ENST00000522133ENST00000522147ENST00000522545ENST00000522785ENST00000523018ENST00000523105ENST00000523517ENST00000523599ENSG00000104368ENST00000220809ENST00000352041ENST00000429089ENST00000429710ENST00000519510ENST00000520523ENST00000521042ENST00000521647ENST00000521694ENST00000522812ENST00000524009ENST00000524261ENSG00000253408ENST00000518213ENST00000518994ENST00000520890ENST00000521470ENST00000521802ENST00000523459
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IG_0001ENSDARG00000062707ENSDART00000090925ENSDART00000147275ENSDARG00000079123ENSDART00000113613ENSDART00000136743ENSDART00000140265CIL_0007IG_0002ENSG00000104365ENST00000342222ENST00000416505ENST00000518679ENST00000520201ENST00000520810ENST00000520835ENST00000523517ENSG00000104368ENST00000220809ENST00000352041ENST00000429089ENST00000429710ENST00000519510ENST00000521042ENST00000521647ENST00000521694ENST00000524009ENSG00000253408ENST00000518213ENST00000518994ENST00000520890ENST00000521470ENST00000521802ENST00000523459
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062707 ENSDART00000090925 N/A N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147275 N/A N/A N/A 3.068±0.00 N/A N/A 1.593±0.47 N/A 0.111±0.00 N/A 1.314±0.00 N/A N/A N/A
ENSDARG00000079123 ENSDART00000113613 N/A N/A N/A N/A N/A N/A 0.219±0.00 0.308±0.00 0.102±0.00 N/A 0.264±0.00 N/A N/A N/A
ENSDART00000136743 N/A N/A N/A N/A N/A N/A 5.979±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140265 N/A N/A N/A N/A N/A N/A 1.200±0.00 N/A 0.104±0.00 N/A 0.311±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104365 ENST00000342222 2.576±0.00 N/A N/A N/A 2.362±0.00 1.224±0.28 1.445±0.00 1.449±0.00 N/A N/A 1.998±0.00 3.785±0.57 3.135±0.40 3.310±0.18
ENST00000416505 N/A N/A N/A N/A 2.152±0.35 N/A N/A N/A N/A N/A N/A 4.929±0.00 N/A 2.647±0.00
ENST00000517388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518679 1.796±0.00 7.636±0.00 N/A 1.938±0.00 N/A 2.104±0.00 0.973±0.00 3.968±0.00 2.384±0.00 N/A N/A 4.380±0.00 1.817±0.12 N/A
ENST00000518983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520201 1.147±0.00 5.260±0.00 N/A 0.597±0.12 1.272±0.00 0.772±0.00 0.680±0.00 1.441±0.00 0.968±0.09 2.034±0.00 N/A 2.805±0.33 N/A 1.434±0.46
ENST00000520320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520810 N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A 1.886±0.00 4.519±0.00 4.118±0.00 4.236±0.00 2.534±0.00 N/A
ENST00000520835 2.367±0.00 N/A 1.315±0.00 1.125±0.00 N/A 1.898±0.20 0.333±0.00 1.964±0.00 N/A N/A 2.283±0.00 6.020±3.27 4.238±1.83 5.926±0.00
ENST00000521225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523517 N/A N/A N/A N/A N/A N/A 1.116±0.00 3.071±0.00 N/A 2.408±0.00 2.067±0.00 N/A N/A N/A
ENST00000523599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104368 ENST00000220809 4.750±0.00 21.364±0.00 3.256±0.00 3.711±0.00 3.432±0.00 7.281±5.36 3.877±0.00 49.632±0.00 18.434±0.00 5.083±2.36 N/A 15.164±9.19 N/A 11.507±0.00
ENST00000352041 N/A N/A N/A 0.298±0.00 5.961±2.00 N/A 0.602±0.00 0.089±0.00 N/A 18.876±0.00 N/A 7.418±0.00 5.945±2.96 3.469±1.02
ENST00000429089 1.965±0.00 N/A N/A 2.101±1.87 8.359±0.00 6.381±0.00 N/A 40.791±0.00 N/A N/A 2.431±0.00 N/A N/A N/A
ENST00000429710 N/A N/A N/A 4.054±0.00 N/A 3.131±0.00 N/A 0.460±0.00 N/A 1.285±0.00 N/A N/A N/A 1.930±0.00
ENST00000519510 N/A N/A 2.386±0.00 0.626±0.00 4.144±0.00 4.406±1.60 0.846±0.27 43.686±0.00 9.066±0.00 21.477±0.00 1.035±0.00 N/A 3.321±0.00 2.069±0.00
ENST00000520523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521042 N/A N/A N/A N/A N/A N/A N/A 1.168±0.00 N/A N/A N/A N/A N/A N/A
ENST00000521647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A
ENST00000521694 N/A N/A N/A N/A N/A N/A N/A 0.574±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524009 2.390±0.00 N/A N/A N/A 6.912±0.00 N/A N/A 0.344±0.00 N/A N/A N/A N/A N/A N/A
ENST00000524261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253408 ENST00000518213 N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.00 N/A N/A 0.055±0.00 N/A 3.455±0.15
ENST00000518994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.972±1.95
ENST00000520890 N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A N/A N/A 0.110±0.00 0.106±0.04 N/A
ENST00000521470 0.413±0.00 0.592±0.00 N/A 0.126±0.00 0.715±0.00 0.153±0.00 N/A N/A N/A 0.248±0.00 N/A N/A N/A N/A
ENST00000521802 0.106±0.00 N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A 7.032±0.00
ENST00000523459 N/A 0.193±0.00 N/A N/A N/A N/A 0.090±0.00 0.390±0.00 N/A N/A N/A N/A N/A N/A

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