C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 8B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342343 PDE8B-004 ENSG00000113231 9606 + 5:77210926-77426633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENST00000342343
Transcript ID Brain Placenta
ENST00000342343 10.821±0.00 2.601±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000160 IEA phosphorelay signal transduction system
GO:0004114 NAS:IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0009187 NAS cyclic nucleotide metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067082 Pde8b-013 protein_coding Mus_musculus 0 3415
ENSMUST00000162153 Pde8b-004 protein_coding Mus_musculus 0 3007
ENSMUST00000022192 Pde8b-014 protein_coding Mus_musculus 0 2217
ENSMUST00000162292 Pde8b-005 protein_coding Mus_musculus 0 1986
ENSMUST00000162412 Pde8b-001 protein_coding Mus_musculus 0 1984
ENSMUST00000159608 Pde8b-003 protein_coding Mus_musculus 0 1522
ENSMUST00000162882 Pde8b-006 processed_transcript Mus_musculus 0 1498
ENSMUST00000172104 Pde8b-012 protein_coding Mus_musculus 0 1487
ENSMUST00000162670 Pde8b-007 protein_coding Mus_musculus 0 710
ENSMUST00000162328 Pde8b-002 retained_intron Mus_musculus 0 616
ENSMUST00000160957 Pde8b-009 protein_coding Mus_musculus 0 614
ENSMUST00000160412 Pde8b-011 retained_intron Mus_musculus 0 490

Loading