C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain PHD finger transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342579 BPTF-006 ENSG00000171634 9606 + 17:67944230-67984378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342579
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342579 1.815±0.00 2.172±0.00 2.587±0.58 2.517±0.00 2.525±0.00 2.566±0.63 0.923±0.00 1.737±0.00 1.159±0.00 3.647±0.87 1.943±0.00 5.633±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0007010 IEA cytoskeleton organization
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057892 Bptf-201 protein_coding Mus_musculus 0 1762
ENSMUST00000106762 Bptf-002 protein_coding Mus_musculus 0 1762
ENSMUST00000106763 Bptf-001 protein_coding Mus_musculus 0 1762
ENSMUST00000147816 Bptf-006 processed_transcript Mus_musculus 0 453
ENSMUST00000138443 Bptf-005 processed_transcript Mus_musculus 0 318
ENSDART00000109601 bptf-201 protein_coding Danio_rerio 0 248
ENSDART00000154200 bptf-001 protein_coding Danio_rerio 0 248

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