C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain PHD finger transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000154200 bptf-001 ENSDARG00000077361 7955 - 3:25480068-25522771 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000154200
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000154200 2.837±0.53 1.665±0.09 2.436±0.65 0.456±0.00 1.305±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KI CIL_0000KI_0001 CGP 3:25471232-25522771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057892 Bptf-201 protein_coding Mus_musculus 0 366
ENSMUST00000106762 Bptf-002 protein_coding Mus_musculus 0 366
ENSMUST00000106763 Bptf-001 protein_coding Mus_musculus 0 366
ENSMUST00000138443 Bptf-005 processed_transcript Mus_musculus 9.99967e-42 174
ENST00000306378 BPTF-002 protein_coding Homo_sapiens 0 257
ENST00000321892 BPTF-201 protein_coding Homo_sapiens 0 257
ENST00000342579 BPTF-006 protein_coding Homo_sapiens 0 248
ENST00000424123 BPTF-001 protein_coding Homo_sapiens 0 248
ENST00000580465 BPTF-005 protein_coding Homo_sapiens 0 248
ENST00000581258 BPTF-004 protein_coding Homo_sapiens 0 241

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