C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344627 SGCA-002 ENSG00000108823 9606 + 17:50166005-50175928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000344627
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000344627 0.954±0.00 3.496±0.00 1.185±0.00 7.802±5.63 0.477±0.00 1.204±0.00 6.296±0.00 1.146±0.41 1.522±0.86 6.140±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219
CIL_0004X4 CIL_0004X4_0002 CGP 17:50164214-50201632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006936 IEA muscle contraction
GO:0007517 IEA muscle organ development
GO:0016010 TAS dystrophin-associated glycoprotein complex
GO:0016012 IEA sarcoglycan complex
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

No Homologs available.

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