C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 7 homolog (S. cerevisiae)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049151 Pus7l-001 ENSMUSG00000033356 10090 - 15:94522688-94543547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049151
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049151 1.364±0.12 1.649±0.64 1.810±0.08 1.131±0.71 2.567±1.01 1.719±0.80 0.645±0.14 0.809±0.33 1.464±0.94 0.911±0.47 0.528±0.06 2.951±1.47 1.974±0.92 1.418±0.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0002 CGP 15:94270163-94543547
CIL_0006R6 CIL_0006R6_0002 CGP 15:94522688-94581815

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008033 IEA tRNA processing
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344862 PUS7L-001 protein_coding Homo_sapiens 0 1199
ENST00000416848 PUS7L-004 protein_coding Homo_sapiens 0 1197
ENST00000431332 PUS7L-005 protein_coding Homo_sapiens 0 852
ENST00000547156 PUS7L-009 protein_coding Homo_sapiens 0 525
ENST00000550784 PUS7L-008 protein_coding Homo_sapiens 0 560
ENST00000551923 PUS7L-002 protein_coding Homo_sapiens 0 1197
ENST00000553166 PUS7L-006 non_stop_decay Homo_sapiens 0 558

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