C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345122 ARHGAP5-201 ENSG00000100852 9606 + 14:32077289-32159728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000345122
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000345122 2.036±0.00 1.804±0.00 8.391±0.90 3.301±0.37 2.457±0.24 2.066±0.23 4.664±0.00 2.097±1.71 4.016±0.73 0.644±0.04 4.274±1.30 1.383±0.78 4.114±2.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RC CIL_0005RC_0002 CGP 14:31489956-32159728
CIL_0000H7 CIL_0000H7_0001 CGP 14:32076114-32837681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002053 IEA positive regulation of mesenchymal cell proliferation
GO:0003924 TAS GTPase activity
GO:0005100 TAS Rho GTPase activator activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005737 TAS cytoplasm
GO:0005829 TAS cytosol
GO:0006184 TAS GTP catabolic process
GO:0007155 TAS cell adhesion
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0007266 TAS Rho protein signal transduction
GO:0008361 IEA regulation of cell size
GO:0016020 IEA membrane
GO:0030335 IEA positive regulation of cell migration
GO:0030879 IEA mammary gland development
GO:0032321 TAS positive regulation of Rho GTPase activity
GO:0042169 IPI SH2 domain binding
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110725 Arhgap5-201 protein_coding Mus_musculus 0 7450
ENSMUST00000181965 Gm26528-001 processed_pseudogene Mus_musculus 0 300

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