C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine kinase 2 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000346049 PTK2B-001 ENSG00000120899 9606 + 8:27325479-27459386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000346049
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000346049 1.278±0.00 19.151±10.27 3.528±0.00 1.839±0.08 1.780±0.00 3.392±0.00 1.312±0.00 4.536±1.34 0.528±0.00 1.767±0.19 5.531±2.47 2.061±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001954 IMP positive regulation of cell-matrix adhesion
GO:0002040 ISS sprouting angiogenesis
GO:0002315 ISS marginal zone B cell differentiation
GO:0004672 IEA protein kinase activity
GO:0004683 ISS calmodulin-dependent protein kinase activity
GO:0004713 TAS:IEA protein tyrosine kinase activity
GO:0004715 IDA non-membrane spanning protein tyrosine kinase activity
GO:0004871 NAS:IEA signal transducer activity
GO:0004972 ISS N-methyl-D-aspartate selective glutamate receptor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005925 IDA:IEA focal adhesion
GO:0006461 TAS protein complex assembly
GO:0006468 TAS:IEA protein phosphorylation
GO:0006915 TAS apoptotic process
GO:0006950 TAS response to stress
GO:0006968 ISS cellular defense response
GO:0007165 TAS signal transduction
GO:0007166 IMP cell surface receptor signaling pathway
GO:0007172 IEA signal complex assembly
GO:0007229 IMP integrin-mediated signaling pathway
GO:0008284 IMP positive regulation of cell proliferation
GO:0008285 IMP negative regulation of cell proliferation
GO:0008360 IMP regulation of cell shape
GO:0010595 IDA positive regulation of endothelial cell migration
GO:0010758 ISS regulation of macrophage chemotaxis
GO:0010976 IMP positive regulation of neuron projection development
GO:0014069 ISS postsynaptic density
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0017146 ISS N-methyl-D-aspartate selective glutamate receptor complex
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0030027 IDA lamellipodium
GO:0030155 IMP regulation of cell adhesion
GO:0030335 IMP positive regulation of cell migration
GO:0030425 ISS dendrite
GO:0030426 ISS growth cone
GO:0030502 ISS negative regulation of bone mineralization
GO:0030838 IMP positive regulation of actin filament polymerization
GO:0032960 ISS regulation of inositol trisphosphate biosynthetic process
GO:0033209 IMP tumor necrosis factor-mediated signaling pathway
GO:0035235 ISS ionotropic glutamate receptor signaling pathway
GO:0038083 ISS peptidyl-tyrosine autophosphorylation
GO:0042976 IMP activation of Janus kinase activity
GO:0043025 ISS neuronal cell body
GO:0043066 IMP negative regulation of apoptotic process
GO:0043267 IDA negative regulation of potassium ion transport
GO:0043524 ISS negative regulation of neuron apoptotic process
GO:0043552 ISS positive regulation of phosphatidylinositol 3-kinase activity
GO:0044297 ISS cell body
GO:0045453 ISS bone resorption
GO:0045638 IMP negative regulation of myeloid cell differentiation
GO:0045860 IMP positive regulation of protein kinase activity
GO:0046330 IMP positive regulation of JNK cascade
GO:0046777 TAS protein autophosphorylation
GO:0048010 IMP vascular endothelial growth factor receptor signaling pathway
GO:0048471 IDA perinuclear region of cytoplasm
GO:0050731 IDA positive regulation of peptidyl-tyrosine phosphorylation
GO:0051279 ISS regulation of release of sequestered calcium ion into cytosol
GO:0051968 ISS positive regulation of synaptic transmission, glutamatergic
GO:0060291 ISS long-term synaptic potentiation
GO:0070098 ISS chemokine-mediated signaling pathway
GO:0070374 IMP positive regulation of ERK1 and ERK2 cascade
GO:0071300 IMP cellular response to retinoic acid
GO:0097440 ISS apical dendrite
GO:2000058 IDA regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2000114 ISS regulation of establishment of cell polarity
GO:2000249 ISS regulation of actin cytoskeleton reorganization
GO:2000310 ISS regulation of N-methyl-D-aspartate selective glutamate receptor activity
GO:2000463 ISS positive regulation of excitatory postsynaptic membrane potential
GO:2000538 ISS positive regulation of B cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022622 Ptk2b-002 protein_coding Mus_musculus 0 3988
ENSMUST00000178730 Ptk2b-201 protein_coding Mus_musculus 0 3975
ENSMUST00000111121 Ptk2b-007 protein_coding Mus_musculus 0 3899
ENSMUST00000089250 Ptk2b-001 protein_coding Mus_musculus 0 2898
ENSMUST00000127083 Ptk2b-003 retained_intron Mus_musculus 0 1733
ENSMUST00000136216 Ptk2b-006 retained_intron Mus_musculus 0 894
ENSMUST00000154865 Ptk2b-005 protein_coding Mus_musculus 0 684
ENSMUST00000148104 Ptk2b-004 retained_intron Mus_musculus 0 597

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