C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 546
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347077 ZNF546-001 ENSG00000187187 9606 + 19:39997076-40017607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMusclePlacentaENST00000347077
Transcript ID Kidney Muscle Placenta
ENST00000347077 0.377±0.00 0.020±0.00 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UL CIL_0003UL_0003 CGP 19:39984134-40056209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165705 Zfp583-201 protein_coding Mus_musculus 3.9937e-43 182
ENSMUST00000108560 Zfp583-002 protein_coding Mus_musculus 3.9937e-43 182
ENSMUST00000062765 Zfp583-001 protein_coding Mus_musculus 3.9937e-43 182
ENSMUST00000077787 Zfp14-201 protein_coding Mus_musculus 5e-27 128
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 2e-21 110
ENSMUST00000172177 Zfp40-201 protein_coding Mus_musculus 1e-17 97
ENSMUST00000140313 Zfp40-002 protein_coding Mus_musculus 1e-17 97
ENSMUST00000037057 Zfp40-001 protein_coding Mus_musculus 1e-17 97
ENSMUST00000137573 Zfp866-001 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000120004 C030039L03Rik-001 protein_coding Mus_musculus 0.0000000008 71
ENSMUST00000105313 Zfp873-201 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000060063 Zfp846-201 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000140668 Zfp846-001 nonsense_mediated_decay Mus_musculus 0.00000004 66
ENSMUST00000115557 Zfp846-002 protein_coding Mus_musculus 0.00000004 66
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000006 58
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00008 55
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 0.0003 53

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