C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoserine aminotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000347159 PSAT1-002 ENSG00000135069 9606 + 9:78297143-78329454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENST00000347159
Transcript ID Colon Muscle
ENST00000347159 0.457±0.14 0.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091W CIL_00091W_0001 VISTA 9:78095963-78699187
CIL_0007V7 CIL_0007V7_0001 VISTA 9:78137288-78740904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004648 NAS:IEA O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0005829 TAS cytosol
GO:0006564 NAS:IEA L-serine biosynthetic process
GO:0008152 IEA metabolic process
GO:0008615 NAS pyridoxine biosynthetic process
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025542 Psat1-001 protein_coding Mus_musculus 0 977
ENSMUST00000162053 Psat1-002 protein_coding Mus_musculus 0 913
ENSMUST00000162416 Psat1-007 protein_coding Mus_musculus 0 608
ENSMUST00000160170 Psat1-005 retained_intron Mus_musculus 1e-38 165

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