C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoserine aminotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025542 Psat1-001 ENSMUSG00000024640 10090 - 19:15904678-15925059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025542 17.513±6.75 6.896±0.39 3.190±0.83 18.428±10.26 7.460±2.45 1.743±0.55 0.800±0.20 8.010±1.05 50.894±40.63 2.751±0.65 0.423±0.21 5.468±1.65 37.276±34.88 3.220±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V7 CIL_0007V7_0002 VISTA 19:15500831-16104666
CIL_00091W CIL_00091W_0002 VISTA 19:15535662-16138956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004648 IEA O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0006564 IEA L-serine biosynthetic process
GO:0008152 IEA metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347159 PSAT1-002 protein_coding Homo_sapiens 0 977
ENST00000376588 PSAT1-001 protein_coding Homo_sapiens 0 1229
ENST00000426107 PSAT1P2-001 processed_pseudogene Homo_sapiens 0 448
ENST00000518968 PSAT1P1-001 processed_pseudogene Homo_sapiens 0 985

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