C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoserine aminotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162053 Psat1-002 ENSMUSG00000024640 10090 - 19:15905127-15924622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162053
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162053 1.391±0.16 1.757±1.00 16.303±8.01 2.127±0.00 0.353±0.14 0.339±0.11 2.796±0.61 10.732±11.13 0.620±0.02 0.156±0.03 2.909±3.09 20.486±11.94 3.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V7 CIL_0007V7_0002 VISTA 19:15500831-16104666
CIL_00091W CIL_00091W_0002 VISTA 19:15535662-16138956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004648 IEA O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0006564 IEA L-serine biosynthetic process
GO:0008152 IEA metabolic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347159 PSAT1-002 protein_coding Homo_sapiens 0 913
ENST00000376588 PSAT1-001 protein_coding Homo_sapiens 0 1164
ENST00000426107 PSAT1P2-001 processed_pseudogene Homo_sapiens 0 444
ENST00000518968 PSAT1P1-001 processed_pseudogene Homo_sapiens 0 942

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