C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348564 PTPRC-002 ENSG00000081237 9606 + 1:198639095-198757283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000348564
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000348564 1.250±0.00 4.128±0.00 1.034±0.00 2.931±1.75 0.313±0.00 0.931±0.00 1.308±0.00 0.881±0.57 16.384±2.05 0.937±0.66 1.089±0.21 0.637±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093I CIL_00093I_0001 VISTA 1:198070272-198672477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0006470 IEA protein dephosphorylation
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0050852 IEA T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182755 Ptprc-003 protein_coding Mus_musculus 0 2143
ENSMUST00000183301 Ptprc-001 protein_coding Mus_musculus 0 2143
ENSMUST00000182283 Ptprc-002 protein_coding Mus_musculus 0 2143
ENSMUST00000112036 Ptprc-009 retained_intron Mus_musculus 0 2143

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