C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00093I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1443 VISTA 9606 1:198070272-198672477
GeneTranscriptPositionBiotype
ENSG00000081237 (PTPRC)
protein tyrosine phosphatase, receptor type, C 		ENST00000348564 (PTPRC-002) 198639095-198757283 protein_coding
ENST00000367364 (PTPRC-004) 198639097-198693206 protein_coding
ENST00000367367 (PTPRC-005) 198639095-198735252 protein_coding
ENST00000367379 (PTPRC-011) 198638671-198708157 protein_coding
ENST00000391970 (PTPRC-014) 198639288-198703346 processed_transcript
ENST00000413409 (PTPRC-009) 198639097-198695171 protein_coding
ENST00000418674 (PTPRC-003) 198639162-198699620 protein_coding
ENST00000427110 (PTPRC-013) 198639288-198703346 processed_transcript
ENST00000442510 (PTPRC-001) 198639040-198757283 protein_coding
ENST00000462363 (PTPRC-007) 198639073-198703874 retained_intron
ENST00000484135 (PTPRC-012) 198696881-198700146 retained_intron
ENST00000491302 (PTPRC-008) 198712790-198718299 retained_intron
ENST00000529828 (PTPRC-010) 198639104-198735252 non_stop_decay
ENST00000530727 (PTPRC-006) 198639019-198732556 protein_coding
ENSG00000151418 (ATP6V1G3)
ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3 		ENST00000281087 (ATP6V1G3-201) 198523224-198540945 protein_coding
ENST00000309309 (ATP6V1G3-002) 198523222-198540945 protein_coding
ENST00000367382 (ATP6V1G3-001) 198523222-198540735 protein_coding
ENST00000489986 (ATP6V1G3-003) 198523341-198540674 protein_coding
ENSG00000223881 (RP11-553K8.2)
 ENST00000429469 (RP11-553K8.2-001) 198597724-198598868 lincRNA
ENSG00000232824 (PRR13P1)
proline rich 13 pseudogene 1 		ENST00000456678 (PRR13P1-001) 198197779-198198186 processed_pseudogene
ENSG00000261573 (RP11-553K8.5)
 ENST00000566394 (RP11-553K8.5-001) 198657553-198667061 antisense
CIL_00093I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1443 VISTA 10090 1:138105488-138707331
GeneTranscriptPositionBiotype
ENSMUSG00000026393 (Nek7)
NIMA (never in mitosis gene a)-related expressed kinase 7 		ENSMUST00000027642 (Nek7-001) 138483837-138619749 protein_coding
ENSMUST00000186017 (Nek7-002) 138485707-138619674 protein_coding
ENSMUST00000187407 (Nek7-004) 138484112-138620218 protein_coding
ENSMUST00000188820 (Nek7-005) 138544191-138619714 processed_transcript
ENSMUST00000191549 (Nek7-003) 138513748-138619704 retained_intron
ENSMUSG00000026394 (Atp6v1g3)
ATPase, H+ transporting, lysosomal V1 subunit G3 		ENSMUST00000027643 (Atp6v1g3-001) 138273738-138289460 protein_coding
ENSMUSG00000026395 (Ptprc)
protein tyrosine phosphatase, receptor type, C 		ENSMUST00000112036 (Ptprc-009) 138063415-138116441 retained_intron
ENSMUST00000182138 (Ptprc-007) 138123873-138175245 retained_intron
ENSMUST00000182283 (Ptprc-002) 138063407-138175305 protein_coding
ENSMUST00000182755 (Ptprc-003) 138063407-138175299 protein_coding
ENSMUST00000183229 (Ptprc-006) 138126209-138175706 retained_intron
ENSMUST00000183262 (Ptprc-004) 138119473-138175299 retained_intron
ENSMUST00000183301 (Ptprc-001) 138063413-138175267 protein_coding
ENSMUST00000185570 (Ptprc-011) 138171977-138175189 retained_intron
ENSMUST00000186628 (Ptprc-010) 138172744-138175249 retained_intron
ENSMUST00000187586 (Ptprc-008) 138117337-138120720 retained_intron
ENSMUST00000188596 (Ptprc-012) 138112030-138115473 retained_intron
ENSMUSG00000099459 (RP24-414I2.1)
predicted gene 28556 		ENSMUST00000187489 (RP24-414I2.1-001) 138190254-138192093 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00093I_0001ENSG00000081237ENST00000348564ENST00000367364ENST00000367367ENST00000367379ENST00000391970ENST00000413409ENST00000418674ENST00000427110ENST00000442510ENST00000462363ENST00000484135ENST00000491302ENST00000529828ENST00000530727ENSG00000151418ENST00000281087ENST00000309309ENST00000367382ENST00000489986ENSG00000223881ENST00000429469ENSG00000232824ENST00000456678ENSG00000261573ENST00000566394CIL_00093I_0002ENSMUSG00000026393ENSMUST00000027642ENSMUST00000186017ENSMUST00000187407ENSMUST00000188820ENSMUST00000191549ENSMUSG00000026394ENSMUST00000027643ENSMUSG00000026395ENSMUST00000112036ENSMUST00000182138ENSMUST00000182283ENSMUST00000182755ENSMUST00000183229ENSMUST00000183262ENSMUST00000183301ENSMUST00000185570ENSMUST00000186628ENSMUST00000187586ENSMUST00000188596ENSMUSG00000099459ENSMUST00000187489
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00093I_0001ENSG00000081237ENST00000348564ENST00000367379ENST00000442510ENST00000462363ENST00000529828ENSG00000151418ENST00000281087ENST00000309309ENST00000367382ENST00000489986ENSG00000223881ENST00000429469ENSG00000232824ENST00000456678ENSG00000261573ENST00000566394CIL_00093I_0002ENSMUSG00000026393ENSMUST00000027642ENSMUST00000186017ENSMUST00000187407ENSMUST00000188820ENSMUST00000191549ENSMUSG00000026394ENSMUST00000027643ENSMUSG00000026395ENSMUST00000112036ENSMUST00000182283ENSMUST00000182755ENSMUST00000183262ENSMUST00000183301ENSMUST00000187586ENSMUSG00000099459ENSMUST00000187489
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081237 ENST00000348564 1.250±0.00 4.128±0.00 N/A 1.034±0.00 2.931±1.75 0.313±0.00 0.931±0.00 1.308±0.00 0.881±0.57 16.384±2.05 N/A 0.937±0.66 1.089±0.21 0.637±0.13
ENST00000367364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A N/A N/A
ENST00000391970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442510 0.510±0.00 6.692±0.00 N/A N/A 3.932±0.00 3.208±0.00 0.232±0.00 N/A 0.880±0.59 7.992±3.92 N/A 0.213±0.00 N/A N/A
ENST00000462363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.591±0.00 N/A N/A N/A
ENST00000484135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529828 N/A N/A N/A 0.820±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151418 ENST00000281087 N/A N/A 2.901±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000309309 N/A N/A 0.429±0.00 N/A N/A N/A N/A 1.080±0.00 N/A N/A N/A N/A N/A N/A
ENST00000367382 N/A N/A N/A N/A 0.046±0.00 N/A N/A 6.485±0.00 N/A N/A N/A N/A 0.124±0.00 0.055±0.01
ENST00000489986 N/A N/A N/A N/A N/A N/A N/A 2.547±0.00 N/A N/A N/A N/A N/A 0.075±0.00
ENSG00000223881 ENST00000429469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00
ENSG00000232824 ENST00000456678 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A
ENSG00000261573 ENST00000566394 0.240±0.00 0.028±0.00 N/A 0.027±0.00 0.518±0.00 N/A 0.118±0.00 N/A N/A N/A N/A 0.030±0.00 0.033±0.00 0.153±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026393 ENSMUST00000027642 15.304±2.08 21.921±2.52 12.422±1.21 2.993±0.75 25.432±7.60 14.968±1.94 15.126±1.08 17.177±4.26 8.535±1.48 26.656±3.07 29.340±0.45 16.840±6.68 6.123±3.00 1.336±0.46
ENSMUST00000186017 N/A N/A N/A 1.608±0.00 N/A 5.639±0.13 N/A N/A 4.780±1.15 N/A N/A N/A 2.248±0.18 N/A
ENSMUST00000187407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.245±0.54 2.130±1.07 N/A
ENSMUST00000188820 N/A 15.488±2.66 N/A N/A 26.655±1.24 22.562±5.14 N/A 31.706±0.00 14.763±0.00 30.105±5.52 N/A 21.945±4.85 N/A 2.299±0.00
ENSMUST00000191549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.477±4.49 N/A N/A
ENSMUSG00000026394 ENSMUST00000027643 N/A N/A N/A 0.008±0.00 N/A N/A N/A 7.593±1.78 N/A 0.068±0.02 N/A 0.010±0.00 N/A 0.155±0.05
ENSMUSG00000026395 ENSMUST00000112036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.01 0.634±0.23 0.076±0.02 N/A
ENSMUST00000182138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182283 4.425±1.14 1.324±0.69 4.265±0.31 0.194±0.01 21.041±2.39 1.128±0.28 0.869±0.30 1.347±0.65 2.551±2.61 9.377±1.29 1.221±1.09 1.711±0.71 0.659±0.44 0.163±0.03
ENSMUST00000182755 N/A N/A 1.245±0.17 0.376±0.00 N/A N/A 0.332±0.00 0.312±0.00 1.269±0.79 N/A 0.202±0.06 0.808±0.43 0.602±0.22 0.108±0.00
ENSMUST00000183229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183262 N/A N/A N/A N/A N/A 2.611±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183301 0.672±0.00 0.333±0.00 N/A 0.035±0.00 31.509±17.69 3.172±0.51 0.775±0.38 1.214±1.02 0.708±0.19 7.003±3.06 3.046±0.00 0.730±0.26 0.174±0.04 0.027±0.00
ENSMUST00000185570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187586 2.360±0.53 1.438±0.32 N/A N/A 17.490±6.44 1.653±0.18 0.864±0.01 0.873±0.37 0.306±0.19 6.860±0.72 N/A 1.836±0.51 N/A 0.086±0.05
ENSMUST00000188596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099459 ENSMUST00000187489 N/A N/A N/A N/A 0.517±0.44 0.186±0.07 N/A N/A N/A 0.114±0.03 N/A N/A N/A N/A

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