C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA-directed), delta interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058793 Poldip3-001 ENSMUSG00000041815 10090 - 15:83125978-83149384 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058793
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058793 31.934±8.07 30.839±3.86 25.465±2.49 20.569±8.17 23.853±7.77 31.607±0.80 7.656±0.64 21.653±0.90 16.818±2.88 27.683±1.34 3.906±0.63 41.927±11.94 43.406±12.50 9.831±4.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LM CIL_0004LM_0002 CGP 15:83125978-83172592

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005737 IEA cytoplasm
GO:0016973 IDA poly(A)+ mRNA export from nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252115 POLDIP3-001 protein_coding Homo_sapiens 0 1720
ENST00000339677 POLDIP3-201 protein_coding Homo_sapiens 0 531
ENST00000348657 POLDIP3-002 protein_coding Homo_sapiens 0 536
ENST00000445215 POLDIP3-003 nonsense_mediated_decay Homo_sapiens 0 1664
ENST00000451060 POLDIP3-202 protein_coding Homo_sapiens 0 536
ENST00000454057 POLDIP3-005 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000463133 POLDIP3-004 processed_transcript Homo_sapiens 0 472
ENST00000491021 POLDIP3-006 processed_transcript Homo_sapiens 0 499
ENST00000617178 POLDIP3-203 protein_coding Homo_sapiens 0 536

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