C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor of activated T-cells 5, tonicity-responsive
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000349945 NFAT5-201 ENSG00000102908 9606 + 16:69565966-69704665 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartMuscleOvaryPlacentaTestisENST00000349945
Transcript ID Bladder Brain Heart Muscle Ovary Placenta Testis
ENST00000349945 2.110±0.00 0.868±0.00 1.074±0.00 0.420±0.00 0.450±0.15 0.502±0.00 0.994±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0001 VISTA 16:69347064-69947578
CIL_0004I1 CIL_0004I1_0001 CGP 16:69565094-69726951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007165 NAS signal transduction
GO:0007588 TAS excretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133026 Nfat5-001 nonsense_mediated_decay Mus_musculus 0 8685
ENSMUST00000077440 Nfat5-201 protein_coding Mus_musculus 0 7812
ENSMUST00000169453 Nfat5-202 protein_coding Mus_musculus 0 7810
ENSMUST00000154474 Nfat5-007 nonsense_mediated_decay Mus_musculus 0 6294
ENSMUST00000125721 Nfat5-005 protein_coding Mus_musculus 0 5939
ENSMUST00000151114 Nfat5-004 protein_coding Mus_musculus 0 5662
ENSMUST00000147588 Nfat5-010 protein_coding Mus_musculus 0 5160
ENSMUST00000075922 Nfat5-002 protein_coding Mus_musculus 0 4468
ENSMUST00000126397 Nfat5-008 retained_intron Mus_musculus 0 2822
ENSMUST00000148006 Nfat5-009 retained_intron Mus_musculus 0 1916
ENSMUST00000151582 Nfat5-003 retained_intron Mus_musculus 0 765
ENSMUST00000126333 Nfat5-011 nonsense_mediated_decay Mus_musculus 0 510
ENSMUST00000144100 Nfat5-012 protein_coding Mus_musculus 0 499
ENSMUST00000149972 Nfat5-006 retained_intron Mus_musculus 0 390

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