C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000350034 TRIM55-003 ENSG00000147573 9606 + 8:66127043-66174818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLungMuscleTestisENST00000350034
Transcript ID Brain Breast Colon Heart Kidney Lung Muscle Testis
ENST00000350034 0.039±0.00 0.320±0.00 0.083±0.00 2.136±0.00 4.381±0.00 0.224±0.00 3.349±0.00 4.782±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DP CIL_0007DP_0002 CGP 8:66021560-66175487
CIL_0005BV CIL_0005BV_0002 CGP 8:66126896-66178725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 NAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 NAS microtubule
GO:0007165 NAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029139 Trim55-201 protein_coding Mus_musculus 0 833

Loading