C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPARC related modular calcium binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354536 SMOC2-002 ENSG00000112562 9606 + 6:168441151-168667994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartMusclePlacentaENST00000354536
Transcript ID Adipose Adrenal Breast Heart Muscle Placenta
ENST00000354536 3.768±0.00 2.347±0.00 1.715±0.00 1.298±0.00 2.137±0.25 3.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VZ CIL_0004VZ_0001 CGP 6:168292830-168673445
CIL_0004W0 CIL_0004W0_0001 CGP 6:168441151-169254044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005539 IEA glycosaminoglycan binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005604 IEA basement membrane
GO:0005614 IEA interstitial matrix
GO:0007165 IEA signal transduction
GO:0008201 IEA heparin binding
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024660 Smoc2-201 protein_coding Mus_musculus 0 1075

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