C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004W0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112562-ENSG00000186340 CGP 9606 6:168441151-169254044
GeneTranscriptPositionBiotype
ENSG00000112562 (SMOC2)
SPARC related modular calcium binding 2 		ENST00000354536 (SMOC2-002) 168441151-168667994 protein_coding
ENST00000356284 (SMOC2-001) 168441151-168667994 protein_coding
ENST00000392100 (SMOC2-004) 168653045-168666503 nonsense_mediated_decay
ENST00000417208 (SMOC2-005) 168653084-168665224 protein_coding
ENST00000477998 (SMOC2-003) 168653203-168673445 processed_transcript
ENST00000535039 (SMOC2-201) 168652959-168667991 protein_coding
ENSG00000186340 (THBS2)
thrombospondin 2 		ENST00000366787 (THBS2-001) 169215780-169254044 protein_coding
ENST00000435791 (THBS2-002) 169248775-169252151 protein_coding
ENST00000461848 (THBS2-004) 169234510-169237412 processed_transcript
ENST00000472733 (THBS2-003) 169246065-169248680 processed_transcript
ENST00000488355 (THBS2-005) 169217454-169223440 processed_transcript
ENST00000617924 (THBS2-201) 169216192-169253832 protein_coding
ENSG00000223485 (RP11-417E7.1)
 ENST00000439703 (RP11-417E7.1-001) 169158092-169162924 lincRNA
ENST00000449466 (RP11-417E7.1-002) 169158261-169162301 lincRNA
ENSG00000225879 (RP3-495K2.3)
 ENST00000444586 (RP3-495K2.3-001) 168962610-168964341 lincRNA
ENSG00000226445 (XXyac-YX65C7_A.2)
 ENST00000444188 (XXyac-YX65C7_A.2-001) 169213254-169239565 antisense
ENSG00000229720 (RP3-495K2.2)
 ENST00000419800 (RP3-495K2.2-001) 169034197-169035642 lincRNA
ENSG00000234519 (RP3-495K2.1)
 ENST00000413324 (RP3-495K2.1-001) 169067818-169069416 lincRNA
ENST00000435377 (RP3-495K2.1-002) 169067899-169069424 lincRNA
ENSG00000235815 (RP1-125N5.2)
 ENST00000436492 (RP1-125N5.2-001) 168716606-168723495 lincRNA
ENSG00000261039 (RP11-417E7.2)
 ENST00000564830 (RP11-417E7.2-001) 169175304-169182740 lincRNA
ENSG00000279810 (RP3-495K2.4)
 ENST00000623089 (RP3-495K2.4-001) 169033381-169034050 TEC
CIL_0004W0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023886-ENSMUSG00000023885 CGP 10090 17:14279506-14694262
GeneTranscriptPositionBiotype
ENSMUSG00000023885 (Thbs2)
thrombospondin 2 		ENSMUST00000170872 (Thbs2-201) 14665500-14694262 protein_coding
ENSMUSG00000023886 (Smoc2)
SPARC related modular calcium binding 2 		ENSMUST00000024660 (Smoc2-201) 14279506-14404790 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004W0_0001ENSG00000112562ENST00000354536ENST00000356284ENST00000392100ENST00000417208ENST00000477998ENST00000535039ENSG00000186340ENST00000366787ENST00000435791ENST00000461848ENST00000472733ENST00000488355ENST00000617924ENSG00000223485ENST00000439703ENST00000449466ENSG00000225879ENST00000444586ENSG00000226445ENST00000444188ENSG00000229720ENST00000419800ENSG00000234519ENST00000413324ENST00000435377ENSG00000235815ENST00000436492ENSG00000261039ENST00000564830ENSG00000279810ENST00000623089CIL_0004W0_0002ENSMUSG00000023885ENSMUST00000170872ENSMUSG00000023886ENSMUST00000024660
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004W0_0001ENSG00000112562ENST00000354536ENST00000356284ENST00000535039ENSG00000186340ENST00000366787ENST00000617924ENSG00000223485ENST00000439703ENST00000449466ENSG00000225879ENST00000444586ENSG00000226445ENST00000444188ENSG00000229720ENST00000419800ENSG00000234519ENST00000413324ENST00000435377ENSG00000235815ENST00000436492ENSG00000261039ENST00000564830ENSG00000279810ENST00000623089CIL_0004W0_0002ENSMUSG00000023885ENSMUST00000170872ENSMUSG00000023886ENSMUST00000024660
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112562 ENST00000354536 3.768±0.00 2.347±0.00 N/A N/A 1.715±0.00 N/A 1.298±0.00 N/A N/A N/A 2.137±0.25 N/A 3.224±0.00 N/A
ENST00000356284 25.755±0.00 12.910±0.00 0.985±0.00 2.009±1.20 7.873±3.38 6.941±4.73 5.550±2.99 2.717±0.00 6.483±6.02 8.157±5.57 5.338±2.72 52.420±27.02 5.401±0.83 45.852±38.55
ENST00000392100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535039 N/A N/A N/A N/A 2.585±0.00 6.485±0.00 N/A 2.298±0.00 0.327±0.00 N/A N/A 47.575±11.65 4.953±4.00 30.254±10.72
ENSG00000186340 ENST00000366787 27.975±0.00 8.564±0.00 0.339±0.00 4.912±3.71 7.438±0.15 11.498±10.58 2.379±1.57 2.087±0.00 2.309±0.00 4.633±3.39 1.104±0.00 20.466±15.14 1.019±0.50 4.334±3.58
ENST00000435791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617924 15.827±0.00 N/A 0.223±0.00 N/A 9.402±0.00 4.104±2.75 1.004±0.00 3.016±0.00 4.250±0.00 N/A 0.444±0.00 7.137±0.00 0.296±0.00 N/A
ENSG00000223485 ENST00000439703 0.228±0.00 0.280±0.00 N/A N/A 0.025±0.00 0.208±0.00 0.024±0.00 N/A N/A N/A N/A 0.292±0.10 0.282±0.12 0.257±0.00
ENST00000449466 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.182±0.11 N/A 0.131±0.00
ENSG00000225879 ENST00000444586 N/A N/A N/A 0.104±0.00 0.067±0.00 N/A N/A N/A 0.217±0.00 N/A N/A 0.046±0.00 N/A N/A
ENSG00000226445 ENST00000444188 0.959±0.00 0.576±0.00 N/A 0.729±0.00 0.308±0.00 0.711±0.65 0.258±0.01 0.582±0.00 0.067±0.02 0.455±0.30 N/A 0.931±0.49 0.396±0.33 0.398±0.01
ENSG00000229720 ENST00000419800 N/A 0.052±0.00 N/A N/A N/A 0.115±0.00 0.016±0.00 N/A N/A N/A N/A 0.092±0.05 0.053±0.00 0.048±0.00
ENSG00000234519 ENST00000413324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00
ENST00000435377 N/A N/A N/A N/A 1.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.542±0.00
ENSG00000235815 ENST00000436492 N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261039 ENST00000564830 N/A N/A N/A N/A 0.154±0.00 N/A 0.047±0.00 N/A 0.022±0.00 N/A N/A 0.091±0.00 0.091±0.00 0.073±0.00
ENSG00000279810 ENST00000623089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.536±0.00 0.108±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023885 ENSMUST00000170872 13.184±1.24 1.402±0.33 28.686±6.57 1.697±0.65 24.357±1.79 9.433±0.48 6.106±0.69 2.349±0.46 0.890±0.59 1.936±0.13 1.266±0.48 13.211±5.68 4.420±3.13 0.270±0.11
ENSMUSG00000023886 ENSMUST00000024660 76.633±51.48 47.646±5.28 61.786±2.43 3.422±1.23 25.004±1.81 17.972±4.81 28.791±3.33 18.378±3.08 2.948±3.02 13.317±0.89 20.872±3.55 107.543±34.52 7.328±4.51 4.491±2.67

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