C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: twist family bHLH transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354571 TWIST1-003 ENSG00000122691 9606 - 7:19113047-19117118 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyENST00000354571
Transcript ID Adrenal Breast Kidney
ENST00000354571 1.109±0.00 10.545±0.00 0.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z6 CIL_0008Z6_0001 VISTA 7:18529093-19130782
CIL_0008Z7 CIL_0008Z7_0001 VISTA 7:18534649-19135746
CIL_0008A9 CIL_0008A9_0001 VISTA 7:18546348-19147607
CIL_0007LO CIL_0007LO_0001 UCNEbase 7:18643621-19413840
CIL_0008VF CIL_0008VF_0001 VISTA 7:18807298-19410628
CIL_00084F CIL_00084F_0001 VISTA 7:18818071-19420090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049089 Twist1-201 protein_coding Mus_musculus 0 664

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