C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 22, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354772 SLC22A17-001 ENSG00000092096 9606 - 14:23346306-23352912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354772
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354772 3.384±0.00 13.245±0.00 87.217±52.00 5.718±0.00 10.313±9.59 1.884±1.46 6.369±0.00 1.707±1.15 5.975±4.57 0.554±0.00 13.723±10.11 8.406±0.81 12.100±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090C CIL_00090C_0001 VISTA 14:23078458-23681621
CIL_0009BW CIL_0009BW_0001 VISTA 14:23137378-23739005
CIL_0008Q4 CIL_0008Q4_0001 VISTA 14:23138150-23738498
CIL_0008QH CIL_0008QH_0001 VISTA 14:23142404-23743714
CIL_00051C CIL_00051C_0001 CGP 14:23321289-23352912
CIL_00051E CIL_00051E_0001 CGP 14:23346306-23365752

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 ISS transmembrane signaling receptor activity
GO:0005773 IEA vacuole
GO:0005887 IDA integral component of plasma membrane
GO:0006811 IEA ion transport
GO:0015891 ISS siderophore transport
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0031301 IDA integral component of organelle membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050772 Slc22a17-201 protein_coding Mus_musculus 0 1860

Loading