C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354880 CTSA-006 ENSG00000064601 9606 + 20:45891322-45898820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverMusclePlacentaTestisENST00000354880
Transcript ID Brain Breast Colon Liver Muscle Placenta Testis
ENST00000354880 25.859±0.00 26.821±0.00 16.668±0.00 16.503±0.00 2.884±0.00 79.138±0.00 11.214±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RY CIL_0000RY_0001 CGP 20:45886489-45891287
CIL_0006GL CIL_0006GL_0001 CGP 20:45888625-45898820
CIL_0006IQ CIL_0006IQ_0002 CGP 20:45890144-45912155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004185 IEA serine-type carboxypeptidase activity
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017904 Ctsa-201 protein_coding Mus_musculus 0 1192
ENSMUST00000103092 Ctsa-001 protein_coding Mus_musculus 0 1192
ENSMUST00000103093 Ctsa-011 protein_coding Mus_musculus 0 1192
ENSMUST00000133077 Ctsa-005 retained_intron Mus_musculus 0 582
ENSMUST00000152721 Ctsa-013 protein_coding Mus_musculus 0 499
ENSMUST00000128596 Ctsa-008 retained_intron Mus_musculus 0 484
ENSMUST00000143293 Ctsa-007 processed_transcript Mus_musculus 0 431
ENSMUST00000127650 Ctsa-002 protein_coding Mus_musculus 0 383
ENSMUST00000144580 Ctsa-017 retained_intron Mus_musculus 0 281
ENSMUST00000143780 Ctsa-004 protein_coding Mus_musculus 0 259
ENSMUST00000130959 Ctsa-006 retained_intron Mus_musculus 2e-22 111

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