C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sushi domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355396 SUSD1-002 ENSG00000106868 9606 - 9:112040785-112175185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleOvaryPlacentaENST00000355396
Transcript ID Brain Colon Muscle Ovary Placenta
ENST00000355396 2.424±1.21 0.504±0.00 0.242±0.00 1.223±0.00 2.002±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XW CIL_0000XW_0001 CGP 9:111896766-112175408
CIL_0005X7 CIL_0005X7_0001 CGP 9:112040785-112333667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040166 Susd1-201 protein_coding Mus_musculus 0 1666
ENSMUST00000107544 Susd1-001 protein_coding Mus_musculus 0 1646
ENSMUST00000136562 Susd1-003 retained_intron Mus_musculus 0 339
ENSMUST00000136077 Susd1-002 retained_intron Mus_musculus 0 339

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