C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-like 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355491 TXNL4A-008 ENSG00000141759 9606 - 18:79973525-79988536 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMuscleOvaryPlacentaTestisENST00000355491
Transcript ID Adipose Breast Heart Liver Muscle Ovary Placenta Testis
ENST00000355491 9.332±0.00 13.998±0.00 8.521±0.00 8.747±0.00 10.168±0.00 36.308±0.00 22.103±9.77 35.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0001 VISTA 18:79552100-80156263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005737 IDA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126360 Txnl4a-002 retained_intron Mus_musculus 0 353
ENSMUST00000025464 Txnl4a-003 protein_coding Mus_musculus 0 353
ENSMUST00000145963 Txnl4a-001 protein_coding Mus_musculus 0 353
ENSMUST00000130675 Txnl4a-004 processed_transcript Mus_musculus 6e-34 148

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