C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355612 KRT39-001 ENSG00000196859 9606 - 17:40958417-40966892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000355612
Transcript ID Breast Testis
ENST00000355612 0.049±0.00 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TM CIL_0000TM_0003 CGP 17:40922696-40966892
CIL_00056U CIL_00056U_000P CGP 17:40958417-40987135

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107445 Krt39-001 protein_coding Mus_musculus 0 1044
ENSMUST00000076948 Krt39-201 protein_coding Mus_musculus 0 1037
ENSMUST00000074253 Krt40-001 protein_coding Mus_musculus 2e-32 145
ENSMUST00000107443 Krt40-002 protein_coding Mus_musculus 0.00000005 64

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