C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3 and PX domains 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355946 SH3PXD2A-201 ENSG00000107957 9606 - 10:103594029-103855406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyPlacentaTestisENST00000355946
Transcript ID Heart Kidney Placenta Testis
ENST00000355946 1.904±0.00 1.000±0.00 1.128±0.00 1.487±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T9 CIL_0006T9_0001 CGP 10:103493979-103855543
CIL_0006UD CIL_0006UD_0001 CGP 10:103594027-103918205

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002102 IDA podosome
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006801 IDA superoxide metabolic process
GO:0030054 IEA cell junction
GO:0035091 IEA phosphatidylinositol binding
GO:0042995 IEA cell projection
GO:0072593 IEA reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111800 Sh3pxd2a-202 protein_coding Mus_musculus 0 3753
ENSMUST00000081619 Sh3pxd2a-201 protein_coding Mus_musculus 0 2599

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