C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | zinc finger, MYND-type containing 8 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000355972  |
ZMYND8-201 |
ENSG00000101040 |
9606 | - |
20:47209214-47356889  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004DE | CIL_0004DE_0001 | CGP | 20:46894624-47356889 |
| CIL_0008NW | CIL_0008NW_0001 | VISTA | 20:47083832-47684912 |
| CIL_0006IW | CIL_0006IW_0002 | CGP | 20:47209214-47656877 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000122 | ISS | negative regulation of transcription from RNA polymerase II promoter |
| GO:0001106 | ISS | RNA polymerase II transcription corepressor activity |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | ISS | nucleus |
| GO:0008270 | IEA | zinc ion binding |
| GO:0070491 | ISS | repressing transcription factor binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109269
|
Zmynd8-001 | protein_coding | Mus_musculus | 0 | 3976 |
|
ENSMUST00000099084
|
Zmynd8-015 | protein_coding | Mus_musculus | 0 | 3624 |
|
ENSMUST00000018050
|
Zmynd8-014 | protein_coding | Mus_musculus | 0 | 3190 |
|
ENSMUST00000152682
|
Zmynd8-009 | processed_transcript | Mus_musculus | 0 | 2804 |
|
ENSMUST00000109266
|
Zmynd8-201 | protein_coding | Mus_musculus | 0 | 2695 |
|
ENSMUST00000170272
|
Zmynd8-202 | protein_coding | Mus_musculus | 0 | 2396 |
|
ENSMUST00000177633
|
Zmynd8-203 | protein_coding | Mus_musculus | 0 | 2396 |
|
ENSMUST00000088113
|
Zmynd8-007 | protein_coding | Mus_musculus | 0 | 2396 |
|
ENSMUST00000153655
|
Zmynd8-013 | protein_coding | Mus_musculus | 0 | 1548 |
|
ENSMUST00000109262
|
Zmynd8-010 | protein_coding | Mus_musculus | 0 | 1548 |
|
ENSMUST00000186319
|
RP23-315J23.1-001 | processed_pseudogene | Mus_musculus | 0 | 1293 |
|
ENSMUST00000191548
|
RP23-315J23.4-001 | processed_pseudogene | Mus_musculus | 0 | 1293 |
|
ENSMUST00000188352
|
RP23-124D10.3-001 | processed_pseudogene | Mus_musculus | 0 | 1293 |
|
ENSMUST00000190271
|
RP24-282E23.2-001 | processed_pseudogene | Mus_musculus | 0 | 1288 |
|
ENSMUST00000149369
|
Zmynd8-017 | processed_transcript | Mus_musculus | 0 | 1218 |
|
ENSDART00000040235
|
zmynd8-201 | protein_coding | Danio_rerio | 0 | 791 |
|
ENSDART00000124510
|
prkcbp1l-201 | protein_coding | Danio_rerio | 0 | 725 |
|
ENSDART00000005015
|
prkcbp1l-001 | protein_coding | Danio_rerio | 0 | 725 |
|
ENSMUST00000139907
|
Zmynd8-016 | processed_transcript | Mus_musculus | 0 | 673 |
|
ENSMUST00000136842
|
Zmynd8-011 | protein_coding | Mus_musculus | 0 | 475 |
|
ENSMUST00000117587
|
Gm9246-001 | processed_pseudogene | Mus_musculus | 0 | 377 |
|
ENSMUST00000139202
|
Zmynd8-004 | processed_transcript | Mus_musculus | 0 | 364 |
|
ENSMUST00000148674
|
Zmynd8-006 | retained_intron | Mus_musculus | 0 | 257 |
|
ENSMUST00000144530
|
Zmynd8-012 | protein_coding | Mus_musculus | 0 | 243 |
