C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPARC related modular calcium binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356284 SMOC2-001 ENSG00000112562 9606 + 6:168441151-168667994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356284
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356284 25.755±0.00 12.910±0.00 0.985±0.00 2.009±1.20 7.873±3.38 6.941±4.73 5.550±2.99 2.717±0.00 6.483±6.02 8.157±5.57 5.338±2.72 52.420±27.02 5.401±0.83 45.852±38.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VZ CIL_0004VZ_0001 CGP 6:168292830-168673445
CIL_0004W0 CIL_0004W0_0001 CGP 6:168441151-169254044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024660 Smoc2-201 protein_coding Mus_musculus 0 1589

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