C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypeptide N-acetylgalactosaminyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356317 GALNT6-001 ENSG00000139629 9606 - 12:51353753-51391409 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000356317
Transcript ID Ovary
ENST00000356317 2.376±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JU CIL_0006JU_0001 CGP 12:51328443-51392867
CIL_0006JV CIL_0006JV_0001 CGP 12:51351247-51515763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IDA Golgi apparatus
GO:0006493 TAS protein O-linked glycosylation
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161514 Galnt6-003 protein_coding Mus_musculus 0 2141
ENSMUST00000052069 Galnt6-002 protein_coding Mus_musculus 0 2141
ENSMUST00000159715 Galnt6-001 protein_coding Mus_musculus 0 2141

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