C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 770
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356321 ZNF770-001 ENSG00000198146 9606 - 15:34978341-34988287 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000356321
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000356321 3.237±0.00 0.963±0.00 0.678±0.00 1.050±0.00 0.821±0.00 2.476±0.00 1.508±0.00 3.098±1.68 1.832±0.15 1.917±0.51 2.361±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0006HG CIL_0006HG_0001 CGP 15:34851782-34988287
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050668 Zfp770-001 protein_coding Mus_musculus 0 1722
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000006 62
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00003 57

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