C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356436 TBC1D7-008 ENSG00000145979 9606 - 6:13304951-13328531 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverOvaryPlacentaTestisENST00000356436
Transcript ID Adipose Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000356436 3.912±0.00 6.895±0.00 3.711±0.00 9.177±0.00 2.429±0.00 8.176±3.27 6.788±2.39 12.253±2.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IC CIL_0003IC_0001 CGP 6:12290363-13290484
CIL_0001BV CIL_0001BV_0002 CGP 6:12716805-13328583
CIL_0008MO CIL_0008MO_0001 VISTA 6:13058507-13660102
CIL_0003IB CIL_0003IB_0001 CGP 6:13266542-13487662

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA:IDA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0017137 IPI Rab GTPase binding
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0031410 IDA cytoplasmic vesicle
GO:0032007 IMP negative regulation of TOR signaling
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0032862 IMP activation of Rho GTPase activity
GO:0033126 IDA positive regulation of GTP catabolic process
GO:0036064 IDA ciliary basal body
GO:0070848 IMP response to growth factor
GO:1902018 IMP negative regulation of cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021797 Tbc1d7-201 protein_coding Mus_musculus 0 900
ENSMUST00000179852 Tbc1d7-202 protein_coding Mus_musculus 0 900

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