C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin 2, neuronal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357077 ANK2-001 ENSG00000145362 9606 + 4:113049676-113383740 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000357077
Transcript ID Brain
ENST00000357077 8.337±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WR CIL_0008WR_0001 VISTA 4:112221234-112822374
CIL_0006YO CIL_0006YO_0002 CGP 4:112818109-113761927

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002027 IMP regulation of heart rate
GO:0003283 IMP atrial septum development
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI:IEA protein binding
GO:0005622 IGI intracellular
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 ISS plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0006874 ISS cellular calcium ion homeostasis
GO:0007165 IEA signal transduction
GO:0007399 IEA nervous system development
GO:0007411 TAS axon guidance
GO:0008104 IEA protein localization
GO:0010628 IGI positive regulation of gene expression
GO:0010881 IGI regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0010882 IMP regulation of cardiac muscle contraction by calcium ion signaling
GO:0014704 ISS intercalated disc
GO:0015459 IEA potassium channel regulator activity
GO:0016323 IDA basolateral plasma membrane
GO:0019899 IPI enzyme binding
GO:0019901 IPI protein kinase binding
GO:0030018 ISS Z disc
GO:0030315 ISS T-tubule
GO:0030507 IPI spectrin binding
GO:0030674 ISS protein binding, bridging
GO:0030913 IEA paranodal junction assembly
GO:0031430 ISS M band
GO:0031647 IC regulation of protein stability
GO:0031672 ISS A band
GO:0033292 ISS T-tubule organization
GO:0033365 IGI protein localization to organelle
GO:0034394 ISS protein localization to cell surface
GO:0034613 IGI cellular protein localization
GO:0036309 ISS protein localization to M-band
GO:0036371 ISS protein localization to T-tubule
GO:0042383 ISS sarcolemma
GO:0043005 IEA neuron projection
GO:0043034 ISS costamere
GO:0043268 ISS positive regulation of potassium ion transport
GO:0044325 ISS ion channel binding
GO:0045121 IEA membrane raft
GO:0045211 IEA postsynaptic membrane
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050821 ISS protein stabilization
GO:0051117 ISS ATPase binding
GO:0051279 IGI regulation of release of sequestered calcium ion into cytosol
GO:0051597 IEA response to methylmercury
GO:0051924 IGI regulation of calcium ion transport
GO:0051928 ISS positive regulation of calcium ion transport
GO:0055117 IMP regulation of cardiac muscle contraction
GO:0060048 IEA cardiac muscle contraction
GO:0060307 IMP regulation of ventricular cardiac muscle cell membrane repolarization
GO:0070296 TAS sarcoplasmic reticulum calcium ion transport
GO:0070972 IGI protein localization to endoplasmic reticulum
GO:0072659 ISS protein localization to plasma membrane
GO:0072661 IEA protein targeting to plasma membrane
GO:0086004 IGI regulation of cardiac muscle cell contraction
GO:0086005 IMP ventricular cardiac muscle cell action potential
GO:0086014 IMP atrial cardiac muscle cell action potential
GO:0086015 ISS SA node cell action potential
GO:0086036 IEA regulation of cardiac muscle cell membrane potential
GO:0086046 TAS membrane depolarization during SA node cell action potential
GO:0086066 ISS atrial cardiac muscle cell to AV node cell communication
GO:0086070 IMP SA node cell to atrial cardiac muscle cell communication
GO:0086091 ISS regulation of heart rate by cardiac conduction
GO:1901018 ISS positive regulation of potassium ion transmembrane transporter activity
GO:1901019 ISS regulation of calcium ion transmembrane transporter activity
GO:1901021 ISS positive regulation of calcium ion transmembrane transporter activity
GO:2001257 IEA regulation of cation channel activity
GO:2001259 ISS positive regulation of cation channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182779 Ank2-007 protein_coding Mus_musculus 0 7361
ENSMUST00000182594 Ank2-013 protein_coding Mus_musculus 0 7173
ENSMUST00000182064 Ank2-008 protein_coding Mus_musculus 0 6059
ENSMUST00000182959 Ank2-015 protein_coding Mus_musculus 0 4516
ENSMUST00000182662 Ank2-026 protein_coding Mus_musculus 0 4279
ENSMUST00000182726 Ank2-027 protein_coding Mus_musculus 0 4220
ENSMUST00000182588 Ank2-014 protein_coding Mus_musculus 0 3821
ENSMUST00000182112 Ank2-028 protein_coding Mus_musculus 0 3592
ENSMUST00000182704 Ank2-001 protein_coding Mus_musculus 0 3592
ENSMUST00000182711 Ank2-002 protein_coding Mus_musculus 0 2370
ENSMUST00000182547 Ank2-004 protein_coding Mus_musculus 0 1849
ENSMUST00000182008 Ank2-003 protein_coding Mus_musculus 0 1700
ENSMUST00000182764 Ank2-020 protein_coding Mus_musculus 0 1613
ENSMUST00000044443 Ank2-017 protein_coding Mus_musculus 0 1613
ENSMUST00000183075 Ank2-018 retained_intron Mus_musculus 0 1609
ENSMUST00000182078 Ank2-022 protein_coding Mus_musculus 0 1535
ENSMUST00000182610 Ank2-016 protein_coding Mus_musculus 0 1485
ENSMUST00000182994 Ank2-009 protein_coding Mus_musculus 0 1485
ENSDART00000021693 CR388002.1-201 protein_coding Danio_rerio 0 1254
ENSMUST00000182452 Ank2-030 protein_coding Mus_musculus 0 743
ENSMUST00000182977 Ank2-021 protein_coding Mus_musculus 0 588
ENSMUST00000182025 Ank2-032 nonsense_mediated_decay Mus_musculus 0 379
ENSMUST00000182050 Ank2-010 retained_intron Mus_musculus 0 305
ENSMUST00000182062 Ank2-031 protein_coding Mus_musculus 0 272
ENSMUST00000183095 Ank2-029 protein_coding Mus_musculus 2e-40 174

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