C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication termination factor 2 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357348 RTFDC1-001 ENSG00000022277 9606 + 20:56468591-56519449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverLungMuscleOvaryENST00000357348
Transcript ID Bladder Brain Breast Heart Liver Lung Muscle Ovary
ENST00000357348 0.589±0.00 6.312±0.00 2.406±0.00 1.388±0.00 2.954±0.00 1.881±0.00 3.366±0.00 2.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_00036G CIL_00036G_0001 CGP 20:56412112-56519449
CIL_00015M CIL_00015M_0002 CGP 20:56468585-56525925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029005 Rtfdc1-001 protein_coding Mus_musculus 0 918
ENSMUST00000109132 Rtfdc1-003 retained_intron Mus_musculus 0 760
ENSMUST00000140048 Rtfdc1-002 processed_transcript Mus_musculus 0 381

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