C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357428 USP33-201 ENSG00000077254 9606 - 1:77695991-77745462 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverLungOvaryPlacentaENST00000357428
Transcript ID Adipose Bladder Brain Breast Colon Liver Lung Ovary Placenta
ENST00000357428 1.020±0.00 0.552±0.00 9.972±0.00 1.766±0.00 1.300±0.00 3.528±0.00 1.216±0.61 2.345±0.27 5.695±2.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0001 VISTA 1:77533579-78136618
CIL_0007KB CIL_0007KB_0001 UCNEbase 1:77564480-77948632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001664 IPI G-protein coupled receptor binding
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 TAS:IEA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005813 IDA centrosome
GO:0006511 IEA:TAS ubiquitin-dependent protein catabolic process
GO:0006897 IEA endocytosis
GO:0007411 ISS axon guidance
GO:0008270 IEA:IDA zinc ion binding
GO:0008277 IMP regulation of G-protein coupled receptor protein signaling pathway
GO:0016477 ISS cell migration
GO:0016579 IDA protein deubiquitination
GO:0030891 TAS VCB complex
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0051298 IMP centrosome duplication
GO:0070536 IDA protein K63-linked deubiquitination
GO:0071108 IDA protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117492 Usp33-002 protein_coding Mus_musculus 0 3175
ENSMUST00000026507 Usp33-001 protein_coding Mus_musculus 0 3020
ENSMUST00000123237 Usp33-003 nonsense_mediated_decay Mus_musculus 0 1262
ENSMUST00000138575 Usp33-005 processed_transcript Mus_musculus 0 531
ENSMUST00000142969 Usp33-004 retained_intron Mus_musculus 3e-38 165

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