C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | single stranded DNA binding protein 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000357475  |
SSBP3-001 |
ENSG00000157216 |
9606 | - |
1:54226920-54406223  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00085J | CIL_00085J_0001 | VISTA | 1:54159373-54763153 |
| CIL_0006W6 | CIL_0006W6_0002 | CGP | 1:54184041-54413479 |
| CIL_00005A | CIL_00005A_0002 | CGP | 1:54225432-54639192 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003697 | IEA | single-stranded DNA binding |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000097934
|
Ssbp3-006 | protein_coding | Mus_musculus | 0 | 2126 |
|
ENSMUST00000072753
|
Ssbp3-002 | protein_coding | Mus_musculus | 0 | 1897 |
|
ENSMUST00000124936
|
Ssbp3-007 | processed_transcript | Mus_musculus | 0 | 1229 |
|
ENSMUST00000141963
|
Ssbp3-004 | processed_transcript | Mus_musculus | 0 | 1229 |
|
ENSMUST00000146659
|
Ssbp3-003 | processed_transcript | Mus_musculus | 0 | 1177 |
|
ENSMUST00000030367
|
Ssbp3-001 | protein_coding | Mus_musculus | 0 | 1177 |
|
ENSMUST00000149926
|
Ssbp3-017 | protein_coding | Mus_musculus | 0 | 811 |
|
ENSMUST00000133827
|
Ssbp3-014 | processed_transcript | Mus_musculus | 0 | 745 |
|
ENSMUST00000150915
|
Ssbp3-005 | processed_transcript | Mus_musculus | 0 | 667 |
|
ENSMUST00000132506
|
Ssbp3-011 | processed_transcript | Mus_musculus | 0 | 610 |
|
ENSMUST00000138475
|
Ssbp3-008 | processed_transcript | Mus_musculus | 0 | 459 |
|
ENSMUST00000136487
|
Ssbp3-016 | processed_transcript | Mus_musculus | 0 | 440 |
|
ENSMUST00000131440
|
Ssbp3-010 | protein_coding | Mus_musculus | 0 | 257 |
|
ENSMUST00000137786
|
Ssbp3-012 | processed_transcript | Mus_musculus | 0 | 244 |
|
ENSMUST00000131111
|
Ssbp3-013 | processed_transcript | Mus_musculus | 0 | 241 |
|
ENSMUST00000156288
|
Ssbp3-015 | processed_transcript | Mus_musculus | 0 | 219 |
|
ENSMUST00000148842
|
Ssbp3-009 | processed_transcript | Mus_musculus | 7.00005e-41 | 172 |
