C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000454445}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358757 RP11-463D19.2-001 ENSG00000258677 9606 - 8:73688691-73878854 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D6 CIL_0001D6_0001 CGP 8:73294612-73747708
CIL_0001NO CIL_0001NO_0001 CGP 8:73420369-73878854

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006515 IEA misfolded or incompletely synthesized protein catabolic process
GO:0008152 IEA metabolic process
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IEA ubiquitin protein ligase binding
GO:0043161 IEA proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0071218 IEA cellular response to misfolded protein

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117146 Ube2w-001 protein_coding Mus_musculus 0 728
ENSMUST00000136455 Ube2w-004 retained_intron Mus_musculus 0 597
ENSMUST00000117112 Gm14932-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000182554 Ube2w-006 protein_coding Mus_musculus 0 364
ENSMUST00000133639 Ube2w-003 nonsense_mediated_decay Mus_musculus 0 350
ENSMUST00000182080 Ube2w-005 processed_transcript Mus_musculus 0 313
ENSMUST00000159558 Stau2-016 protein_coding Mus_musculus 0 281
ENSMUST00000162627 Stau2-012 protein_coding Mus_musculus 0 281
ENSMUST00000145092 Stau2-011 protein_coding Mus_musculus 0 272
ENSMUST00000162435 Stau2-009 protein_coding Mus_musculus 0 272
ENSMUST00000127420 Stau2-005 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000162007 Stau2-004 protein_coding Mus_musculus 0 270
ENSMUST00000027052 Stau2-003 protein_coding Mus_musculus 0 270
ENSMUST00000132919 Ube2w-002 retained_intron Mus_musculus 0 207
ENSMUST00000153966 Stau2-008 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000128957 Stau2-006 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000115359 Stau2-002 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000162751 Stau2-001 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000144138 Stau2-017 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000131257 Stau2-015 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000149320 Stau2-014 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000054668 Stau2-013 protein_coding Mus_musculus 6.02558e-44 182

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