C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breakpoint cluster region
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359540 BCR-002 ENSG00000186716 9606 + 22:23180365-23315950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359540
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359540 11.796±0.00 16.213±0.00 1.421±0.00 16.663±0.00 19.399±0.00 4.950±4.35 6.351±0.00 10.368±8.81 8.984±0.00 24.542±0.00 0.610±0.36 8.782±3.49 12.614±1.35 9.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002X0 CIL_0002X0_0001 CGP 22:23145326-23318037

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 TAS protein tyrosine kinase activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005096 TAS:IEA GTPase activator activity
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0006468 TAS:IEA protein phosphorylation
GO:0007165 TAS:IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0016020 IDA membrane
GO:0016301 TAS kinase activity
GO:0018108 TAS peptidyl-tyrosine phosphorylation
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0043234 IDA protein complex
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164107 Bcr-201 protein_coding Mus_musculus 0 3603
ENSDART00000101282 bcr-001 protein_coding Danio_rerio 0 822

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